In the present work, the effects of nanoscale parameter and Coriolis force together are investigated on vibrating eigenvalues of fluid-conveying carbon nanotube (CNT). A nonlocal Timoshenko beam and a plug flow model are implemented to derive fluid–structure interaction (FSI) governing equations of motion. These equations solved by Galerkin to obtain instability pattern, critical fluid velocities (CFVs), frequency and damping at different nanoscale parameter, boundary conditions, and aspect ratios. The results demonstrate existence of multiple types of instabilities and bifurcations, which are deviated from classic FSI buckling and flutters' instabilities, and caused by damping from coalition of nanoscale effect and fluid's Coriolis force, this phenomena are more noticeable in the CNTs with asymmetrical boundary conditions and smaller size.